this post was submitted on 10 Nov 2024
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[–] theneverfox@pawb.social 9 points 1 week ago (5 children)

My biology teacher had this thing where every test you had to submit a question. My question was always the same - how the fuck does atp synthase work?

She did not appreciate my question especially after the first time, but it was always genuine... How the fuck does that shit work? If you understand it, please attempt to put it into words

[–] ziggurat@lemmy.world -5 points 1 week ago* (last edited 1 week ago) (2 children)

Adenosine triphosphate (ATP) functions as the primary energy currency of the cell, enabling various biological processes. Here's an explanation of how ATP works on a molecular level:

Structure of ATP

ATP is composed of three main components:

  1. Adenine: A nitrogenous base.

  2. Ribose: A five-carbon sugar molecule, which together with adenine forms adenosine.

  3. Three Phosphate Groups: Linked sequentially through high-energy bonds.

Energy Storage and Release

The key to ATP’s function lies in the high-energy bonds between its phosphate groups, particularly the bond between the second (beta) and third (gamma) phosphate groups.

  1. Hydrolysis of ATP:

When ATP is hydrolyzed (reacts with water), it loses its terminal (gamma) phosphate group, releasing energy.

The reaction is:

ATP + H2O > ADP + Pi + Energy

  1. Energy Release:

The hydrolysis of ATP releases about 30.5 kJ/mol (7.3 kcal/mol) of energy.

This energy is used to perform cellular work, such as muscle contraction, active transport across cell membranes, and chemical synthesis.

Mechanism of ATP Utilization

  1. Phosphorylation:

ATP transfers its phosphate group to another molecule (a process called phosphorylation), making that molecule more reactive.

This is often facilitated by enzymes known as kinases.

  1. Energy Coupling:

Cells couple the exergonic reaction of ATP hydrolysis with endergonic reactions (reactions that require energy).

For example, during muscle contraction, ATP hydrolysis provides the energy for the motor protein myosin to move along actin filaments.

ATP Synthesis

ATP is regenerated from ADP through cellular respiration, which consists of three main stages:

  1. Glycolysis: Breakdown of glucose into pyruvate, producing a small amount of ATP.

  2. Citric Acid Cycle (Krebs Cycle): Further breakdown of metabolic products, generating electron carriers (NADH and FADH2).

  3. Oxidative Phosphorylation:

Electrons from NADH and FADH2 are transferred through the electron transport chain in the inner mitochondrial membrane.

This creates a proton gradient that drives ATP synthesis via ATP synthase.

ATP Synthase Function

ATP synthase is a complex enzyme that synthesizes ATP from ADP and using the energy derived from the proton gradient.

  1. Proton Gradient: Protons flow back into the mitochondrial matrix through ATP synthase.

  2. Rotational Catalysis:

The flow of protons causes the rotation of a part of ATP synthase.

This mechanical energy drives the chemical synthesis of ATP from ADP and .

In summary, ATP serves as a molecular battery, storing energy in its high-energy phosphate bonds and releasing it upon hydrolysis to fuel various cellular activities. Its synthesis and utilization are tightly regulated processes essential for life.

[–] leonine@sh.itjust.works 2 points 5 days ago

Thank you chat GPT. Here have my downvote.

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